Publications and conference presentations

Selected facility associated publications and conference presentations:

A. Selected publications with facility staff as coauthors

  1. Kang K, Mezhebovsky T, Chen W, McCardle JA., Zhang S, Sullivan EP, Sass PM and Routhier E. 2016 Use of a stable-isotope-labeled reporter peptide and antioxidants for reliable quantification of methionine oxidation in amonoclonal antibody by liquid chromatography/mass spectrometry.  Rapid Commun. Mass Spectrom. 2016, 30, 1734–1742 http://onlinelibrary.wiley.com/doi/10.1002/rcm.7646/abst
  2. Martin LB, Sherwood RW, Nicklay JJ, Yang Y, Muratore-Schroeder TL, Anderson ET, Thannhauser TW, Rose JK, Zhang S. 2016 Application of wide selected-ion monitoring (WiSIM)-data independent acquisition (DIA) to identify tomato fruit proteins regulated by the CUTIN DEFICIENT2 transcription factor.  Proteomics. 2016 Apr 19. doi: 10.1002/pmic.201500450. PMID: 27089858
  3. Sadhukhan S, Liu X, Ryu D, Nelson OD, Stupinski JA, Li Z, Chen W, Zhang S, Weiss RS, Locasale JW, Auwerx J, Lin H. 2016 Metabolomics-assisted proteomics identifies succinylation and SIRT5 as important regulators of cardiac function. Proc Natl Acad Sci U S A. 2016 Apr 19;113(16):4320-5. doi: 10.1073/pnas.1519858113.  PMID: 27051063
  4. Li X, Jackson A, Xie M, Wu D, Tsai WC, Zhang S. 2016  Proteomic insights into floral biology. Biochim Biophys Acta. 2016 Aug;1864(8):1050-60. doi: 10.1016/j.bbapap.2016.02.023. PMID:26945514
  5. Gottlieb CD, Zhang S, Linder ME. 2015 The Cysteine-rich Domain of the DHHC3 Palmitoyltransferase Is Palmitoylated and Contains Tightly Bound Zinc. J Biol Chem. 290(49):29259-69. PubMed PMID: 26487721; PubMed Central PMCID: PMC4705932
  6. Hochrainer K, Pejanovic N, Olaseun VA, Zhang S, Iadecola C, Anrather J. 2015 The ubiquitin ligase HERC3 attenuates NF-κB-dependent transcription independently of its enzymatic activity by delivering the RelA subunit for degradation. Nucleic Acids Res. 43(20):9889-904. PubMed PMID: 26476452
  7. Allison AB, Organtini LJ, Zhang S, Hafenstein SL, Holmes EC, Parrish CR. 2015 Single Mutations in the VP2 300 Loop Region of the Three-Fold Spike of the Carnivore Parvovirus Capsid Can Determine Host Range. J Virol. 90(2):753-67. PubMed PMID: 26512077
  8. Ollis AA, Chai Y, Natarajan A, Perregaux E, Jaroentomeechai T, Guarino C, Smith J, Zhang S, DeLisa MP. 2015 Substitute sweeteners: diverse bacterial oligosaccharyltransferases with unique N-glycosylation site preferences. Sci Rep. 5:15237. PubMed PMID: 26482295
  9. Tang X, Meng Q, Gao J, Zhang S, Zhang H, Zhang M. 2015 Label-free Quantitative Analysis of Changes in Broiler Liver Proteins under Heat Stress using SWATH-MS Technology. Scientific Reports. 5:15119. PubMed PMID: 26459884; PubMed Central PMCID: PMC4602270
  10. Deng GM, Yang QS, He WD, Li CY, Yang J, Zuo CW, Gao J, Sheng O, Lu SY, Zhang S, Yi GJ. 2015 Proteomic analysis of conidia germination in Fusarium oxysporum f. sp. cubense tropical race 4 reveals new targets in ergosterol biosynthesis pathway for controlling Fusarium wilt of banana. Appl Microbiol Biotechnol. 99(17):7189-207.  PMID: 26129952
  11. Gibson GE, Xu H, Chen HL, Chen W, Denton TT, Zhang S. 2015 Alpha-ketoglutarate dehydrogenase complex-dependent succinylation of proteins in neurons and neuronal cell lines. J Neurochem. 134(1):86-96. PMCID: PMC4472501
  12. Zhou S, Li M, Guan Q, Liu F, Zhang S, Chen W, Yin L, Qin Y, Ma F. 2015 Physiological and proteome analysis suggest critical roles for the photosynthetic system for high water-use efficiency under drought stress in Malus. Plant Sci. 236:44-60. PMID: 26025520
  13. Cubillos-Ruiz JR, Silberman PC, Rutkowski MR, Chopra S, Perales-Puchalt A, Song M, Zhang S, Bettigole SE, Gupta D, Holcomb K, Ellenson LH, Caputo T, Lee AH, Conejo-Garcia JR, Glimcher LH. 2015 ER Stress Sensor XBP1 Controls Anti-tumor Immunity by Disrupting Dendritic Cell Homeostasis. Cell. 161(7):1527-38. PubMed PMID: 26073941
  14. Yang QS, Gao J, He WD, Dou TX, Ding LJ, Wu JH, Li CY, Peng XX, Zhang S, Yi GJ. 2015 Comparative transcriptomics analysis reveals difference of key gene expression between banana and plantain in response to cold stress. BMC Genomics. 16(1):446. PMCID: PMC4461995
  15. Chen S, Lang P, Chronis D, Zhang S, De Jong WS, Mitchum MG, Wang X. 2015 In Planta Processing and Glycosylation of a Nematode CLAVATA3/ENDOSPERM SURROUNDING REGION-Like Effector and Its Interaction with a Host CLAVATA2-Like Receptor to Promote Parasitism. Plant Physiol. 167(1):262-72. PMID: 25416475
  16. Otwell AE, Sherwood RW, Zhang S, Nelson OD, Li Z, Lin H, Callister SJ, Richardson RE. 2015 Metal reductases from Gram-positive metal reducer. Environ Microbiol. 17(6):1977-90. PMID: 25389064
  17. Ollis AA, Zhang S, Fisher AC, DeLisa MP. 2014 Engineered oligosaccharyltransferases with greatly relaxed acceptor-site specificity. Nat Chem Biol. 10(10):816-22. PMID: 25129029
  18. Wang P, Sun X, Xie Y, Li M, Chen W, Zhang  S, Liang D, Ma F. 2014 Melatonin regulates proteomic changes during leaf senescence in Malus hupehensis. J Pineal Res. 2014 Oct;57(3):291-307. PMID: 25146528
  19. Lin Z, Su X, Chen W, Ci B, Zhang S, Lin H. 2014 Dph7 catalyzes a previously unknown demethylation step in diphthamide biosynthesis. J Am Chem Soc. 136(17): 6179-82. PMID: 24739148
  20. Ruiz-May E, Hucko S, Howe K, Zhang  S, Sherwood R, Thannhauser TW and Rose JK. 2014 A Comparative Study of Lectin Affinity Based Plant N-Glycoproteome Profiling Using Tomato Fruit as a Model. Molecular & Cellular Proteomics. 13(2):566-79. PMID: 24198434
  21. Lu Y, Li Y, Yang Q, Zhang Z, Chen Y, Zhang S, Peng XX. 2014 Suppression of glycolate oxidase causes glyoxylate accumulation that inhibits photosynthesis through deactivating Rubisco in rice. Physiol Plant. 150(3):463-76. PMID: 24102419
  22. Vaidya AT, Top D, Manahan CC, Tokuda JM, Zhang S, Pollack L, Young MW, Crane BR. 2013 Flavin reduction activates Drosophila cryptochrome. Proc Natl Acad Sci U S A. 110(51):20455-60. PMID: 24297896
  23. Thannhauser TW, Shen M, Sherwood R, Howe K, Fish T, Yang Y, Chen W, Zhang S. 2013 A workflow for large-scale empirical identification of cell wall N-linked glycoproteins of tomato (Solanum lycopersicum) fruit by tandem mass spectrometry.  Electrophoresis. 34(16):2417-31. PMID: 23580464
  24. Diani-Moore S, Zhang S, Ram P, Rifkind AB. 2013 Aryl hydrocarbon receptor activation by dioxin targets phosphoenolpyruvate carboxykinase (PEPCK) for ADP-ribosylation via 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD)-inducible poly(ADP-ribose) polymerase (TiPARP). J Biol Chem. 288(30):21514-25. PMID: 23770670
  25. Wu M, Shen Q, Yang Y, Zhang S, Qu W, Chen J, Sun H, Chen S. 2013 Disruption of YPS1 and PEP4 genes reduces proteolytic degradation of secreted HSA/PTH in Pichia pastoris GS115. J Ind Microbiol Biotechnol. 40(6):589-99. PMID: 23529666
  26. Li C, Zuo C, Deng G, Kuang R, Yang Q, Hu C, Sheng O, Zhang S, Ma L, Wei Y, Yang J, Liu S, Biswas MK, Viljoen A, Yi G. 2013 Contamination of bananas with beauvericin and fusaric acid produced by Fusarium oxysporum f. sp. cubense. PLoS One. 8(7):e70226. PMID: 23922960
  27. Chen JW, Scaria J, Mao C, Sobral B, Zhang S, Lawley T and Chang YF. 2013 Proteomic Comparison of Historic and Recently Emerged Hypervirulent Clostridium difficile Strains. J Proteome Res 12:1151-61. PMID 23298230
  28. Jiang H, Sherwood R, Zhang S, Zhu X, Liu Q, Graeff R, Kriksunov IA, Lee HC, Hao Q and Lin H. 2013 Identification of ADP-ribosylation sites of CD38 mutants by precursor ion scanning mass spectrometry. Anal Biochem 433:218-26. PMID 23123429.  
  29. Lu S, Faris JD, Sherwood R and Edwards MC. 2013 Dimerization and protease resistance: new insight into the function of PR-1. J Plant Physiol 170:105-10. PMID 22921679.  
  30. Blake-Hodek KA, Williams BC, Zhao Y, Castilho PV, Chen W, Mao Y, Yamamoto TM and Goldberg ML. 2012 Determinants for activation of the atypical AGC kinase Greatwall during M phase entry. Mol Cell Biol 32:1337-53. PMID 22354989.
  31. Su X, Lin Z, Chen W, Jiang H, Zhang S and Lin H. 2012 Chemogenomic approach identified yeast YLR143W as diphthamide synthetase. Proc Natl Acad Sci U S A. 109:19983-7. PMID 23169644
  32. Yang QS, Wu JH, Li CY, Wei YR, Sheng O, Hu CH, Kuang RB, Huang YH, Peng XX, McCardle JA, Chen W, Yang Y, Rose JK, Zhang S and Yi GJ. 2012 Quantitative proteomic analysis reveals that antioxidation mechanisms contribute to cold tolerance in plantain (Musa paradisiaca L.; ABB Group) seedlings. Mol Cell Proteomics 11:1853-69. PMID 22982374.  
  33. Janvilisri T, Scaria J, Teng CH, McDonough SP, Gleed RD, Fubini SL, Zhang S, Akey B, Chang YF 2012 Temporal differential proteomes of Clostridium difficile in the pig ileal-ligated loop model. PLoS ONE 7(9): e45608. PMID 23029131.  
  34. Zhang X, Bolt M, Guertin MJ, Chen W, Zhang S, Cherrington BD, Slade DJ, Dreyton CJ, Subramanian V, Bicker KL, Thompson PR, Mancini MA, Lis JT, Coonrod SA. 2012 Peptidylarginine deiminase 2-catalyzed histone H3 arginine 26 citrullination facilitates estrogen receptor α target gene activation. Proc Natl Acad Sci. 109(33):13331-6. PMID 22853951.  
  35. Ruiz-May E, Thannhauser TW, Zhang S and Rose JK. 2012 Analytical technologies for identification and characterization of the plant N-glycoproteome. Front Plant Sci. 3:150. PMID 22783270. 
  36. Zhang, S., Sherwood, R., Yang, Y., Fish, T., Chen, W., McCardle, J., Jones, R.M., Yusibov, V., May, E., Rose, J.R.C and Thannhauser, T.W. 2012 Comparative characterization of the glycosylation profiles of an influenza hemagglutinin produced in plant and insect hosts. Proteomics. 12 (8): 1269-88. PMID 22577028.  
  37. Hashimoto, Y., Zhang, S., Zhang, S., Chen, YR and Blissard,G.W. 2012 Correction: BTI-Tnao38, a new cell line derived from Trichoplusia ni, is permissive for AcMNPV infection and produces high levels of recombinant proteins. BMC Biotechnology.12:12. PMID 22531032.  
  38. Lopez-Casado G, Covey PA, Bedinger PA, Mueller LA, Thannhauser TW, Zhang S, Fei Z, Giovannoni JJ and Rose JK. 2012 Enabling proteomic studies with RNA-Seq: The proteome of tomato pollen as a test case. Proteomics. 12 (6): 761-74. PMID 22539427. 
  39. Hochrainer K, Racchumi G, Zhang S, Iadecola C, Anrather J. 2012 Monoubiquitination of nuclear RelA negatively regulates NF-κB activity independent of proteasomal degradation. Cell Mol Life Sci. 69(12):2057-73. PMID 22261743. 
  40. Su X, Chen W, Lee W, Jiang H, Zhang S, Lin H. 2012 YBR246W Is Required for the Third Step of Diphthamide Biosynthesis. J Am Chem Soc. 134(2): 773-6. PMID 2218824.  
  41. Du J, Zhou Y, Su X, Yu JJ, Khan S, Jiang H, Kim J, Woo J, Kim JH, Choi BH, He B, Chen W, Zhang S, Cerione RA, Auwerx J, Hao Q, Lin H. 2011 Sirt5 is a NAD-dependent protein lysine demalonylase and desuccinylase. Science. 334(6057):806-9. PMID 22076378
  42. Yang Y, Qiang X, Owsiany K, Zhang S, Thannhauser TW, Li L. 2011 Evaluation of different multidimensional LC-MS/MS pipelines for isobaric tags for relative and absolute quantitation (iTRAQ)-based proteomic analysis of potato tubers in response to cold storage. J Proteome Res. 10(10):4647-60. PMID 21842911.
  43. Zhang S., Yang Y., Thannhauser T.W. 2011 Impact of mass spectrometry-based proteomics analysis on biomarker and gene discovery of disease models, in Gene Discovery for Disease Models (Gu, W., and Wang, Y., Eds.), pp 471-530, John Wiley & Sons, Inc., Hoboken, New Jersey.
  44. Wang, S.K., Weaver, J.D., Zhang, S., Lei, X.G. 2011 Knockout of SOD1 promotes conversion of selenocysteine to dehydroalanine in murine hepatic GPX1 protein. Free Radic Biol Med. 51:197-204. PMID 21420488
  45. Huang, C.J., Damasceno, L.M., Anderson, K.A., Zhang, S., Old, L.J., Batt CA. 2011 A proteomic analysis of the Pichia pastoris secretome in methanol-induced cultures. Appl Microbiol Biotechnol.  90(1): 235-247. PMID 21305280.  
  46. Fisher, A.C., Haitjema, C.H., Guarino, C., Celik, E., Endicott, C.E., Reading, C.A., Merritt, J.H., Ptak, A.C., Zhang, S., Delisa, M.P. 2011 Secretory and extracellular production of N-linked glycoproteins in Escherichia coli. Appl Environ Microbiol. 77(3): 871-881. PMID 21131519
  47. Asano, A., Nelson, J.L. Zhang, S., Travis,A.J. 2010 Characterization of the proteomes associating with three distinct membrane raft sub-types in murine sperm. Proteomics. 10 (19): 3494-3505. PubMed 20815087
  48. Hashimoto, Y., Zhang, S., Blissard,G.W. 2010 Ao38, a new cell line from eggs of the black witch moth, Ascalapha odorata (Lepidoptera: Noctuidae), is permissive for AcMNPV infection and produces high levels of recombinant proteins. BMC Biotechnology.10:50. PMID 20602790
  49. Werner, J.J. Ptak, A.C.,, Rahm, B.G., Zhang, S., Richardson, R.E. 2009 Absolute quantification of Dehalococcoides proteins: enzyme bioindicators of chlorinated ethene dehalorespiration. Environ Microbiol 11(10), 2687-2697. PMID 19650881.  
  50. Rao, P., Satelli, A. Zhang, S., Srivastava, S., Srivenuqopal, K., Rao, S. 2009 RNF2 is the target for phosphorylation by the p38 MAPK and ERK signaling pathways. Proteomics. 9, 2776-2787. PMID 19405034.  
  51. Beyenbach, K.W., Baumgart, S., Lau, K., Piermarini, P.M., Zhang, S. 2009 Signaling to the apical membrane and to the paracellular pathway: changes in the cytosolic proteome of Aedes Malpighian tubules. The Journal of Experimental Biology. 212, 329-340. PMID 19151207

B. Selected other publications enabled by the facility's resources and services

  1. Wang TT, Maamary J, Tan GS, Bournazos S, Davis CW, Krammer F, Schlesinger SJ, Palese P, Ahmed R, Ravetch JV. 2015 Anti-HA glycoforms drive B cell affinity selection and determine influenza vaccine efficacy. Cell. 162(1):160-9.  PMID: 26140596
  2. Wang X, Chen XJ. 2015 A cytosolic network suppressing mitochondria-mediated proteostatic stress and cell death. Nature. 2015 Aug 27;524(7566):481-4. doi: 10.1038/nature14859. PMID: 2619219
  3. Zhang X, Tiewsiri K, Kain W, Huang L, Wang P. 2012 Resistance of Trichoplusia ni to Bacillus thuringiensis toxin Cry1Ac is independent of alteration of the cadherin-like receptor for Cry toxins. PLoS One. 7(5):e35991. PMID 22606242.
  4. Krauchunas AR, Horner VL, Wolfner MF. 2012 Protein phosphorylation changes reveal new candidates in the regulation of egg activation and early embryogenesis in D. melanogaster. Dev Biol. 370(1):125-34. PMID 22884528
  5. Yeats TH, Martin LB, Viart HM, Isaacson T, He Y, Zhao L, Matas AJ, Buda GJ, Domozych DS, Clausen MH, Rose JK. 2012 The identification of cutin synthase: formation of the plant polyester cutin. Nat Chem Biol. 8(7):609-11. PMID 22610035.  
  6. Tiewsiri K, Wang P. 2011 Differential alteration of two aminopeptidases N associated with resistance to Bacillus thuringiensis toxin Cry1Ac in cabbage looper. Proc Natl Acad Sci U S A. 108(34):14037-42. PMID 21844358.
  7. Sirot LK, Hardstone MC, Helinski ME, Ribeiro JM, Kimura M, Deewatthanawong P, Wolfner MF, Harrington LC. 2011 Towards a semen proteome of the dengue vector mosquito: protein identification and potential functions. PLoS Negl Trop Dis. 5(3):e989. PMID 21423647.  
  8. Jiang H, Kim JH, Frizzell KM, Kraus WL, Lin H. 2010 Clickable NAD analogues for labeling substrate proteins of poly(ADP-ribose) polymerases. J Am Chem Soc. 132(27): 9363-72. PMID 20560583.  
  9. Sirot, L.K, Poulson, R.L, McKenna, M.C., Girnary, H., Wolfner, M.F. and Harrington, L.C. 2008 Identity and transfer of male reproductive proteins of the yellow fever mosquito Aedes aegypti. Ins. Bioch. Mol. Bio. 38, 176-89. PMID 18207079
  10. Lee, J.W., Soonsanga, S. and Helmann J.D. 2007 A complex thiolate switch regulates the Bacillus subtilis organic peroxide sensor OhrR. Proc Natl Acad Sci U S A. 22;104(21):8743-48. PMID 17502599
  11. Lee, J.W. and Helmann J.D. 2006 The PerR transcription factor senses H2O2 by metal-catalysed histidine oxidation. Nature. 440(7082):363-7. PMID 16541078.  
  12. Lee, J.W. and Helmann J.D. (2006) Biochemical characterization of the structural Zn2+ site in the Bacillus subtilis peroxide sensor PerR. J Biol Chem. 18;281(33):23567-78. PMID 16766519.   

C. Selected poster and oral presentations

  1. Sadhukhan, S; Liu X., Nelsonm O.D., Stupinski, J.A., Zhang, S., Weiss, R.S., Locasale, J.W. and Lin, H. 2016 Metabolomics-assisted proteomics reveals the function of lysine succinylation and SIRT5 in regulation of β-oxidation of long-chain fatty acids. Proceedings of the 64th ASMS Conference on Mass Spectrometry and Allied Topics. San Antonio, TX. June 5-June 9, 2016. Poster #: MP591.
  2. Sherwood, R., Anderson, E., Yang, Y. and Zhang, S. 2016 Application of HCD product-dependent ETD (HCD-pd-ETD) workflow for characterization of O-linked glycosylation of Human Immunoglobulin G3. Association of Biomolecular Resource Facility (ABRF). Fort Lauderdale, FL, Feb 20-23, 2016.
  3. Martin, L., Nicklay, J., Schroeder T, Hassan  T, Anderson, E., Rose J, Zhang, S. 2015 Label-free quantitative analysis by WiSIM-DIA with an Orbitrap Fusion to identify proteins involved in the cuticle formation of tomato fruit. Proceedings of the 63rd ASMS Conference on Mass Spectrometry and Allied Topics. St Louis, MO. May 31- June4, 2015. Poster #: MP491.
  4. Yang, Y.,Liu, Y.,Anderson, E., Sherwood, R., Thannhauser, T.W. and Zhang, S. 2015 Statistical assessment of HCD-MS2, single- and multi-notch MS3 methods for improved quantitation accuracy of mulberry proteome under salt/drought stress. Proceedings of the 63rd ASMS Conference on Mass Spectrometry and Allied Topics. St Louis, MO. May 31- June4, 2015. Poster #: ThP570.
  5. Chen W, Lin Z, Su X, Ci B, Zhang S, Lin H. 2014 Identification of a novel post-translational modification, methylated Diphthine, in diphthamide biosynthetic pathway. Proceedings of the 62nd ASMS Conference on Mass Spectrometry and Allied Topics. Baltimore, MD. June 15-19, 2014. Poster #: MP118.
  6. Otwell AE, Sherwood RW, Nelson OD, Li Z, Lin H, Callister SJ, Richardson RE, Zhang S. 2014 A function-based intact protein analysis workflow for discovery of novel microbial metal and uranium reductases in a Gram positive bacterium.  Proceedings of the 62nd ASMS Conference on Mass Spectrometry and Allied Topics. Baltimore, MD. June 15-19, 2014. Poster #: TP203.
  7. Jiang H, Sherwood R, Zhang S, Zhu X, Liu Q, Graeff R, Kriksunov IA, Lee HC, Hao Q, Lin H. 2013 Precursor Ion Scanning for Identification of ADP-Ribosylation Sites of CD38 Mutants. Proceedings of the 61st ASMS Conference on Mass Spectrometry and Allied Topics. Minneapolis, MN. June 9-13, 2013. Poster #: ThP328.
  8. Chen, W., Gottlieb CD, Linder ME., Sherwood, R., Jiang, H., Lin, H., and Zhang, S., 2013 A simple work flow for identification of acylated proteins by LC MS/MS using sequentially connected C4 and C18 columns. Proceedings of the 61st ASMS Conference on Mass Spectrometry and Allied Topics. Minneapolis, MN. June 9-13, 2013. Poster #: WP559.
  9. Kang P, Mezhebovsky T, Chen W, McCardle J,  Zhang S, Routhier E, Sass P. 2013 Use of stable isotope-labeled reference standards and antioxidants for reliable evaluation of methionine oxidation by LC-MS/MS in therapeutic proteins. Proceedings of the 61st ASMS Conference on Mass Spectrometry and Allied Topics. Minneapolis, MN. June 9-13, 2013. Oral #: TOC 2:30pm.
  10. Zhang, S. Mass Spectrometry-based Proteomics for Animal Science Research: Applications and Prospects. 2013 Annual Conference of State Key Laboratory of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China. January 18-20, 2013.
  11. Sherwood, R., Yang, Y., Fish, T., Chen, W., McCardle, J., Jones, R.M., Rose, J.R.C and Thannhauser, T.W. and Zhang, S. 2012 An LCMS-based analytical strategy for comparative characterization of N-linked glycoproteins: variants of recombinant influence hemagglutinin as a test case. Proceedings of the 60th ASMS Conference on Mass Spectrometry and Allied Topics. Vancouver, Canada. May 20-24, 2012. Poster #: MP159.
  12. Chen, W., Su, X., Lin, H., and Zhang, S., 2012 Identification of a novel in vivo post-translationally modified histidine residue: Diphthine in the investigation of biosynthetic pathway of diphthamide.  Proceedings of the 60th ASMS Conference on Mass Spectrometry and Allied Topics. Vancouver, Canada. May 20-24, 2012. Poster #: WP149.
  13. McCardle, J., Chen, W., Corso, T., van Pelt, C., Sherwood, R. and Zhang, S. 2012 A novel, robotic, self-connecting, “Plug-and-Play” nanoLC/ESI platform for enhanced shotgun proteomics and phospho-proteome analysis. Proceedings of the 60th ASMS Conference on Mass Spectrometry and Allied Topics. Vancouver, Canada. May 20-24, 2012. Poster #: WP622.
  14. Zhang, S. Quantitative LC-MS/MS techniques for characterizing selenocysteine abundance change in the hepatic GPX1 protein of SOD1 knockout mice. 14th International Symposium on Trace Elements in Man and Animals, Enshi, Hubei, China. September 19-24, 2011.
  15. Chen, W., Su, X., Lin, H., and Zhang, S., 2011 Characterization of lysine malonylation, a novel modification on several metabolic enzymes by tandem mass spectrometry.  10th Annual World conference of the Human Proteome Organization. Geneva, Switzerland, Sept. 4-7, 2011. Poster #: P1653.
  16. Chen, W., Sherwood, R., McCardle, J., May, E., Rose, J., Thannhauser, T., Zhang, S. 2011 Characterization of N-linked Glycosylated Proteins in Complex Tomato Fruit Extracts Coupling HILIC with Precursor Ion Scanning and MS3. Proceedings of the 59th ASMS Conference on Mass Spectrometry and Allied Topics. Denver, CO, June 5-9, 2011. Poster #: TP519.
  17. Shen, M., Hucko, S., Howe, K., Cilia, M., Zhang, S. Yang, Y., Thannhauser, T. 2011 Characterization of the cell wall glycoproteome of tomato (Solanum lycopersicum) fruit by tandem mass spectrometry.  Proceedings of the 59th ASMS Conference on Mass Spectrometry and Allied Topics. Denver, CO, June 5-9, 2011. Poster #: ThP307.
  18. Yang, Y., Sherwood, R., Thannhauser, T. and Zhang, S. 2011 Comparison of Precursor Ion Discovery on Synapt HDMS and Precursor Ion Scan on 4000 Q-trap for Identification of N-linked Glycoproteins.  Proceedings of the 59th ASMS Conference on Mass Spectrometry and Allied Topics. Denver, CO, June 5-9, 2011. Poster #: ThP576.
  19. Yang, Y., Li, L., Xu, Q., Zhang, S., and Thannhauser, T. 2010 Enhancing Proteome Coverage and Quantitative Precision by Combining OGE-RP and hpRP-RP 2D-LC-MS/MS Approaches for iTRAQ-based Analysis of Potato Extracts .  9th Annual World conference of the Human Proteome Organization. Sydney, Australia, Sept. 19-23, 2010. Poster #: Wednesday PO013.
  20. Zhang, S., Wang, S., Lei, X. 2010 Decreased selenocysteine abundance found in the hepatic GPX1 protein of SOD1-/- mice by quantitative LC-MS/MS analysis. 9th Annual World conference of the Human Proteome Organization. Sydney, Australia, Sept. 19-23, 2010. Poster #: Monday PO084.
  21. Zhang, S., Hashimoto, Y., Blissard,G.W. 2010 Characterization of N-linked Glycosylation of a Recombinant Human Protein by Precursor Ion Scanning Quadrupole/Linear Ion Trap MS. Proceedings of the 58th ASMS Conference on Mass Spectrometry and Allied Topics. Salt Lake City, UT, May 23-27, 2010. Poster #: MP135.
  22. Zhang, S. Investigation of protein-protein complex and protein-ligand noncovalent interactions by quadrupole, ion mobility separation time-of-flight mass spectrometry. 12th International Congress of  Biochemistry and Molecular Biology, Hangzhou, China. August 7-10, 2009.
  23. Yang, Y., Zhou, X., Li, L., Zhang, S., Thannhauser, T. 2009 Comparison of SCX and OGE Fractionation Approaches in Quantitative Shotgun Analysis of iTRAQ labeled Arabidopsis Plant Extracts. TP009.  Proceedings of the 57th ASMS Conference on Mass Spectrometry and Allied Topics. Philadelphia, PA, May31-June5, 2009.
  24. Zhang, S., Pollard, A., Daly, M. and Crane, B. 2009 Investigation of Protein-Protein Complex Noncovalent Interactions by Quadrupole, Ion Mobility Separation Time-of-flight Mass Spectrometry.  WP452.  Proceedings of the 57th ASMS Conference on Mass Spectrometry and Allied Topics. Philadelphia, PA, May31-June5, 2009.