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Cornell University

ATAC-Seq Standard package

Sample Submission: At least 25k permeabalized nuclei, frozen in storage media.
Please contact us for reccommended sample preparation protocol.

Library Preparation: Illumina TDE1 enzyme.

Sequencing: minimum 20M (PE 2X150) raw reads.
Deeper sequencing is available and may be needed to attain recommended coverage (extra cost).

Standard analysis: Read preprocessing, mapping to reference genome, peak calling and annotation, data QC reports including mapping/duplication rates and "fraction of reads in peaks" (FRIP), differential accessibility analysis (DESeq2).
Motig enrichment analysis is available upon request

Service pricing

ATAC-Seq Standard package
ServiceInternal PriceExternal Price
Samples 1-24 (ea.) $315 $470
Samples 25+ (ea.) $265 $470
Add 20M Additional Reads (per sample) $160 $255
Custom Services
Custom Lab WorkCustom Analysis
$55/hr $125/hr
Custom projects are available on a limited basis and require pre-approval from the Director of the TREx Facility