ATAC-Seq Standard package
Sample Submission: At least 25k permeabalized nuclei, frozen in storage media.
Please contact us for reccommended sample preparation protocol.
Library Preparation: Illumina TDE1 enzyme.
Sequencing: minimum 20M (PE 2X150) raw reads.
Deeper sequencing is available and may be needed to attain recommended coverage (extra cost).
Standard analysis: Read preprocessing, mapping to reference genome, peak calling and annotation, data QC reports including mapping/duplication rates and "fraction of reads in peaks" (FRIP), differential accessibility analysis (DESeq2).
Motig enrichment analysis is available upon request
|Service||Internal Price||External Price|
|Samples 1-24 (ea.)||$315||$470|
|Samples 25+ (ea.)||$265||$470|
|Add 20M Additional Reads (per sample)||$160||$255|
|Custom Lab Work||Custom Analysis|
|Custom projects are available on a limited basis and require pre-approval from the Director of the TREx Facility|