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Cornell University

10X Genomics single-cell libraries

Our facility is equipped with a Chromium X instrument (by 10x Genomics) that enables profiling gene expression, cell-surface markers, and/or chromatin accessibility for hundreds to thousands of single cells in parallel. This microfluidic device partitions cells into emulsion droplets where cell-specific barcodes are associated with the cellular readout of interest.

  • We provide full-service support through data generation for all Chromium X assays. Samples must be submitted as single cell (or single nucleus) suspensions.
  • First-time users must meet with us prior to scheduling an experiment or placing an order.
  • Sample processing requires  reservation a minimum of 1 week, and ideally 2-3 weeks, in advance.

We will soon be launching workflow support for 10x Genomics Visium HD Spatial Gene Expression assays, please inquire!

The listed prices below are estimates based on a typical project’s workflow following a single Chromium X run. Sequencing costs are not included in the pricing below. Assays or product extensions that involve more than one library (e.g. Feature Barcoding, V(D)J, ATAC), will increase the price based on the number of additional libraries prepared. 

The Universal 3’ Gene Expression Assay is the only assay for which we provide reagents. Users running other assays must purchase their own reagent kits in advance, and our pricing for these other assays does not reflect the costs of the kits. 

Please review our Guidelines and Policies before ordering

Service pricing

Spatial Transcriptomics VisiumHD
DescriptionInternal price (Cornell and Cornell affiliates)External Price
10x-VisiumHD: slide processing and library preps $1,591 Academic/Non-Profit: $1,992 / Industry: $2,608
Standard Single Cell 3'RNA-Seq (Chromium X run and one library per sample, GEM-X reagents included)
DescriptionInternal price (Cornell and Cornell affiliates)External price
Single Cell 3'RNA-Seq library – 1 sample, 1 library $3,350 Academic/Non-Profit: $4,190 / Industry: $5,490
Single Cell 3'RNA-Seq library - 2 samples, 1 library each $5,095 Academic/Non-Profit: $6,370 / Industry: $8,350
Single Cell 3'RNA-Seq library - 3 samples, 1 library each $6,840 Academic/Non-Profit: $8,550 / Industry: $11,210
Single Cell 3'RNA-Seq library - 4 samples, 1 library each $8,585 Academic/Non-Profit: $10,730 / Industry: $14,070
Single Cell 3'RNA-Seq library - 5 samples, 1 library each $10,330 Academic/Non-Profit: $12,910 / Industry: $16,930
Single Cell 3'RNA-Seq library - 6 samples, 1 library each $12,075 Academic/Non-Profit: $15,090 / Industry: $19,790
Single Cell 3'RNA-Seq library - 7 samples, 1 library each $13,820 Academic/Non-Profit: $17,270 / Industry: $22,650
Single Cell 3'RNA-Seq library - 8 samples, 1 library each $15,565 Academic/Non-Profit: $19,450 / Industry: $25,510
Other Chromium X Assays (Chromium X run and one library preparation per sample, reagents not included)
DescriptionInternal price (Cornell and Cornell affiliates)External price
Chromium X Assay (Kit Not Included) – 1 sample, 1 library $1,463 Academic/Non-Profit: $1,881 / Industry: $2,399
Chromium X Assay (Kit Not Included) – 2 samples, 1 library each $1,546 Academic/Non-Profit: $1,987 / Industry: $2,533
Chromium X Assay (Kit Not Included) – 3 samples, 1 library each $1,629 Academic/Non-Profit: $2,093 / Industry: $2,667
Chromium X Assay (Kit Not Included) – 4 samples, 1 library each $1,712 Academic/Non-Profit: $2,199 / Industry: $2,801
Chromium X Assay (Kit Not Included) – 5 samples, 1 library each $1,795 Academic/Non-Profit: $2,305 / Industry: $2,935
Chromium X Assay (Kit Not Included) – 6 samples, 1 library each $1,878 Academic/Non-Profit: $2,411 / Industry: $3,069
Chromium X Assay (Kit Not Included) – 7 samples, 1 library each $1,961 Academic/Non-Profit: $2,517 / Industry: $3,203
Chromium X Assay (Kit Not Included) – 8 samples, 1 library each $2,044 Academic/Non-Profit: $2,623 / Industry: $3,337
Feature Barcoding for Standard Single Cell 3'RNA-Seq (additional library preparation, reagents included)
DescriptionInternal price (Cornell and Cornell affiliates)External price
Feature Barcoding for 3’RNAseq – 1 sample, 1 library $675 Academic/Non-Profit: $845 / Industry: $1,105
Feature Barcoding for 3’RNAseq – 2 samples, 1 library each $890 Academic/Non-Profit: $1,115 / Industry: $1,455
Feature Barcoding for 3’RNAseq – 3 samples, 1 library each $1,105 Academic/Non-Profit: $1,385 / Industry: $1,805
Feature Barcoding for 3’RNAseq – 4 samples, 1 library each $1,320 Academic/Non-Profit: $1,655 / Industry: $2,155
Feature Barcoding for 3’RNAseq – 5 samples, 1 library each $1,535 Academic/Non-Profit: $1,925 / Industry: $2,505
Feature Barcoding for 3’RNAseq – 6 samples, 1 library each $1,750 Academic/Non-Profit: $2,195 / Industry: $2,855
Feature Barcoding for 3’RNAseq – 7 samples, 1 library each $1,965 Academic/Non-Profit: $2,465 / Industry: $3,205
Feature Barcoding for 3’RNAseq – 8 samples, 1 library each $2,180 Academic/Non-Profit: $2,735 / Industry: $3,555
Additional 10x Library Preparation (additional Chromium libraries or Visium libraries, reagents not included)
DescriptionInternal price (Cornell and Cornell affiliates)External price
10x Library Preparation (kit not included) – 1 sample, 1 library $543 Academic/Non-Profit: $681 / Industry: $889
10x Library Preparation (kit not included) – 2 samples, 1 library each $626 Academic/Non-Profit: $787 / Industry: $1,023
10x Library Preparation (kit not included) – 3 samples, 1 library each $709 Academic/Non-Profit: $893 / Industry: $1,157
10x Library Preparation (kit not included) – 4 samples, 1 library each $792 Academic/Non-Profit: $999 / Industry: $1,291
10x Library Preparation (kit not included) – 5 samples, 1 library each $875 Academic/Non-Profit: $1,105 / Industry: $1,425
10x Library Preparation (kit not included) – 6 samples, 1 library each $958 Academic/Non-Profit: $1,211 / Industry: $1,559
10x Library Preparation (kit not included) – 7 samples, 1 library each $1,041 Academic/Non-Profit: $1,317 / Industry: $1,693
10x Library Preparation (kit not included) – 8 samples, 1 library each $1,124 Academic/Non-Profit: $1,423 / Industry: $1,827
Other 10X services
DescriptionInternal price (Cornell and Cornell affiliates)External price
10x-consultation and analysis $125 Academic/Non-Profit: $205 / Industry: $205