SNP Genotyping
Depending on the goal and scope of your project, we offer a range of options
Capillary Electrophoresis (Sanger) sequencing
This approach is designed to assess DNA variation at a limited set of loci in the genome.
- PCR products
- Plasmids
- Microsatellites and fingerprinting
Whole-Genome Sequencing (WGS)
This approach is designed to genotype a large number of SNPs anywhere in the genome. Depending on the scope of the project, we offer two modalities.
- Skim sequencing: This method is cost-effective but yields low coverage. It is recommended for large projects that need to survey genetic diversity at the genome-wide scale.
- High-coverage sequencing: Two approaches are available depending on the size of your project.
ORDER high-coverage sequencing for a small project
ORDER high-coverage sequencing for a large project
Amplicon sequencing
This approach is designed to genotype a large number of SNPs at target sites throughout the genome.
- rAmpSeq
- AmpSeq
- rhAmpSeq
Real-time PCR
You can use our real-time PCR instrument to detect heterozygotes and genotype SNPs.
RESERVE time on the real-time instrument
Genomic Innovation Hub: open-source protocols and collaboration
Whole-genome linked-read sequencing (“haplotagging”) workflows using open-source protocols are also being developed in the Genomics innovation Hub
contact the Genomics Innovation Hub about collaboration opportunities